Transcript: ENSDART00000139001.3 nfixb-202

Description

nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]

Gene Synonyms

zgc:136878

Location

About this transcript

This transcript has 11 exons, is annotated with 14 domains and features, is associated with 5186 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000139001.3	nfixb-202	2883	485aa	ENSDARP00000121809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R834	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000090235.5	nfixb-201	2870	440aa	ENSDARP00000084668.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RLS5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,883 bps, Translation length: 485 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000139001.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.