Transcript: ENSDART00000138990.2 ifih1-202

Description

interferon induced with helicase C domain 1 [Source:ZFIN;Acc:ZDB-GENE-081104-438]

Gene Synonyms

mda5, si:dkey-81j5.2

Location

About this transcript

This transcript has 12 exons, is annotated with 21 domains and features, is associated with 597 variant alleles and maps to 227 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000003913.10	ifih1-201	3438	997aa	ENSDARP00000013943.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4B9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188480.1	ifih1-203	2989	685aa	ENSDARP00000151951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QBG0	-
ENSDART00000138990.2	ifih1-202	2153	704aa	ENSDARP00000118927.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R1C5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,153 bps, Translation length: 704 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000138990.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.