Transcript: ENSDART00000138972.3 zfhx3a-202

Description

zinc finger homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-050309-237]

Location

About this transcript

This transcript has 9 exons, is annotated with 156 domains and features, is associated with 562 variant alleles and maps to 218 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113668.5	zfhx3a-201	13619	3356aa	ENSDARP00000103045.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138972.3	zfhx3a-202	13161	3356aa	ENSDARP00000113495.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7K3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 13,161 bps, Translation length: 3,356 residues

Version

ENSDART00000138972.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]