Transcript: ENSDART00000138942.2 EWSR1-203

Description

EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]

Location

About this transcript

This transcript has 5 exons, is associated with 160 variant alleles and maps to 70 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000024282.9	EWSR1-201	2456	626aa	ENSDARP00000024102.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4J1A5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141445.2	EWSR1-204	986	325aa	ENSDARP00000119576.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146734.3	EWSR1-202	1251	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000138942.2	EWSR1-203	497	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 497 bps,

Version

ENSDART00000138942.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.