Transcript: ENSDART00000138909.3 tpmt.2-202

Description

thiopurine S-methyltransferase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041010-177]

Gene Synonyms

si:ch73-345a19.3, zgc:101684

Location

About this transcript

This transcript has 10 exons, is associated with 268 variant alleles and maps to 109 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000158262.2	tpmt.2-203	748	232aa	ENSDARP00000138689.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W621	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000051695.7	tpmt.2-201	723	232aa	ENSDARP00000124897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W621	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138909.3	tpmt.2-202	993	120aa	ENSDARP00000124514.1	Nonsense mediated decay	F8W334	-

Summary

Statistics

Exons: 10, Coding exons: 4, Transcript length: 993 bps, Translation length: 120 residues

Version

ENSDART00000138909.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.