Transcript: ENSDART00000138895.4 igsf9ba-202

Description

immunoglobulin superfamily, member 9Ba [Source:ZFIN;Acc:ZDB-GENE-060503-729]

Location

Chromosome 15: 19,131,849-19,250,543 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 73 domains and features, is associated with 2625 variant alleles and maps to 191 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000033845.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092705.6	igsf9ba-201	8807	1446aa	ENSDARP00000087137.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RC10	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000138895.4	igsf9ba-202	9597	1367aa	ENSDARP00000117171.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000152749.2	igsf9ba-203	701	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 9,597 bps, Translation length: 1,367 residues

Version

ENSDART00000138895.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138895.4 igsf9ba-202

Summary

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Transcript: ENSDART00000138895.4 igsf9ba-202

Summary

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