Transcript: ENSDART00000138764.3 WDHD1-203

Description

WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]

Location

About this transcript

This transcript has 13 exons, is associated with 1002 variant alleles and maps to 234 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133710.4	WDHD1-202	3665	1112aa	ENSDARP00000113096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4J7S6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110507.4	WDHD1-204	4865	1095aa	ENSDARP00000099718.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151885.2	WDHD1-201	499	101aa	ENSDARP00000126539.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138764.3	WDHD1-203	1466	305aa	ENSDARP00000115064.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 13, Coding exons: 10, Transcript length: 1,466 bps, Translation length: 305 residues

Version

ENSDART00000138764.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.