Transcript: ENSDART00000138734.3 znf395a-204

Description

zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]

Gene Synonyms

fa14e01, wu:fa14e01, zgc:158367

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 431 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136059.3	znf395a-203	2656	436aa	ENSDARP00000116662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R143	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138734.3	znf395a-204	670	167aa	ENSDARP00000122414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGT8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133154.2	znf395a-202	545	68aa	ENSDARP00000114763.1	Nonsense mediated decay	E9QEA4	-
ENSDART00000132203.2	znf395a-201	615	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 670 bps, Translation length: 167 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138734.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.