Transcript: ENSDART00000138730.2 hoxd3a-202

Description

homeobox D3a [Source:NCBI gene (formerly Entrezgene);Acc:30349]

Location

Chromosome 9: 1,938,985-1,959,552 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 390 variant alleles and maps to 125 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000059280.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146131.2	hoxd3a-203	1970	396aa	ENSDARP00000120633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PRW4 O42370	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000082359.5	hoxd3a-201	2567	396aa	ENSDARP00000093704.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PRW4 O42370	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190712.1	hoxd3a-204	1919	396aa	ENSDARP00000156094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PRW4 O42370	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138730.2	hoxd3a-202	480	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 480 bps,

Version

ENSDART00000138730.2

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138730.2 hoxd3a-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000138730.2 hoxd3a-202

Summary

About Us

Get help

Our sister sites

Follow us