Transcript: ENSDART00000138725.2 zgc:136971-203

Description

zgc:136971 [Source:ZFIN;Acc:ZDB-GENE-060421-3674]

Location

About this transcript

This transcript has 2 exons, is associated with 66 variant alleles and maps to 78 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078369.6	zgc:136971-201	2824	714aa	ENSDARP00000072831.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9C3Q8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131925.2	zgc:136971-202	705	199aa	ENSDARP00000112806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138725.2	zgc:136971-203	574	42aa	ENSDARP00000121322.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 574 bps, Translation length: 42 residues

Version

ENSDART00000138725.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.