Transcript: ENSDART00000138646.3 si:ch211-213a13.5-201

Description

si:ch211-213a13.5 [Source:ZFIN;Acc:ZDB-GENE-050208-711]

Location

About this transcript

This transcript has 47 exons, is annotated with 189 domains and features, is associated with 226 variant alleles and maps to 740 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138646.3	si:ch211-213a13.5-201	9865	3009aa	ENSDARP00000122354.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NX52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182762.1	si:ch211-213a13.5-203	1455	251aa	ENSDARP00000149568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q8W6	-
ENSDART00000188599.1	si:ch211-213a13.5-205	1159	373aa	ENSDARP00000154834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QI44	-
ENSDART00000187027.1	si:ch211-213a13.5-204	1139	378aa	ENSDARP00000149632.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q912	-
ENSDART00000178327.2	si:ch211-213a13.5-202	921	306aa	ENSDARP00000147904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RLD7	-

Summary

Statistics

Exons: 47, Coding exons: 45, Transcript length: 9,865 bps, Translation length: 3,009 residues

Version

ENSDART00000138646.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.