Transcript: ENSDART00000138633.3 cd99-203

Description

CD99 molecule [Source:ZFIN;Acc:ZDB-GENE-061103-391]

Location

Chromosome 1: 33,375,207-33,379,972 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 24 variant alleles and maps to 20 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000051975.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136383.3	cd99-202	1819	220aa	ENSDARP00000116659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181515.1	cd99-207	4419	206aa	ENSDARP00000155934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4U1	-
ENSDART00000141347.2	cd99-205	987	206aa	ENSDARP00000122599.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4U1	-
ENSDART00000146648.3	cd99-206	980	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000136097.3	cd99-201	835	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138633.3	cd99-203	736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000141107.2	cd99-204	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 736 bps,

Version

ENSDART00000138633.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138633.3 cd99-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000138633.3 cd99-203

Summary

About Us

Get help

Our sister sites

Follow us