Transcript: ENSDART00000138611.3 COL14A1-201

Description

collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]

Location

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 847 variant alleles and maps to 66 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027982.9	COL14A1-204	5595	1864aa	ENSDARP00000017432.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9Y1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134087.2	COL14A1-203	6466	1382aa	ENSDARP00000122257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137912.2	COL14A1-202	947	253aa	ENSDARP00000120255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138611.3	COL14A1-201	530	95aa	ENSDARP00000115530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 530 bps, Translation length: 95 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138611.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.