Transcript: ENSDART00000138595.3 c3b.1-201

Description

complement component c3b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2211]

Gene Synonyms

c3.7, si:dkey-21e7.2, wu:fb99g02

Location

Chromosome 22: 26,180,184-26,236,275 reverse strand.

About this transcript

This transcript has 42 exons, is annotated with 42 domains and features, is associated with 1362 variant alleles and maps to 227 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093068.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162640.2	c3b.1-202	5046	1681aa	ENSDARP00000137422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0N4SU63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000138595.3	c3b.1-201	5813	1680aa	ENSDARP00000118396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMP6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000167169.2	c3b.1-203	4797	1598aa	ENSDARP00000133112.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0N4STW3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 42, Coding exons: 42, Transcript length: 5,813 bps, Translation length: 1,680 residues

Version

ENSDART00000138595.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138595.3 c3b.1-201

Summary

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Transcript: ENSDART00000138595.3 c3b.1-201

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