Transcript: ENSDART00000138496.2 RAD54B-201

Description

RAD54 homolog B [Source:ZFIN;Acc:ZDB-GENE-060810-50]

Location

Chromosome 16: 26,732,086-26,757,649 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 21 domains and features, is associated with 17 variant alleles and maps to 107 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000092134.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138496.2	RAD54B-201	3229	917aa	ENSDARP00000113995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHY4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000185175.1	RAD54B-205	2571	856aa	ENSDARP00000153235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000191605.1	RAD54B-203	2535	844aa	ENSDARP00000157024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000183552.1	RAD54B-202	2532	843aa	ENSDARP00000150108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000183257.1	RAD54B-204	1926	641aa	ENSDARP00000145152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 3,229 bps, Translation length: 917 residues

Version

ENSDART00000138496.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138496.2 RAD54B-201

Summary

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Transcript: ENSDART00000138496.2 RAD54B-201

Summary

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