Transcript: ENSDART00000138474.2 fhl1b-203

Description

four and a half LIM domains 1b [Source:ZFIN;Acc:ZDB-GENE-031219-1]

Gene Synonyms

cb1039, fhl

Location

About this transcript

This transcript has 3 exons, is associated with 396 variant alleles and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000079187.6	fhl1b-201	1805	280aa	ENSDARP00000073643.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7A2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134322.2	fhl1b-202	1444	280aa	ENSDARP00000115361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7A2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138474.2	fhl1b-203	927	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 927 bps,

Version

ENSDART00000138474.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.