Transcript: ENSDART00000138398.3 ankzf1-203

Description

ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]

Location

Chromosome 9: 12,834,414-12,870,537 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 78 variant alleles and maps to 19 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000041904.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177283.2	ankzf1-204	3131	723aa	ENSDARP00000143920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4D7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124957.4	ankzf1-201	2655	723aa	ENSDARP00000107366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F4D7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131385.2	ankzf1-202	833	278aa	ENSDARP00000120228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000138398.3	ankzf1-203	491	99aa	ENSDARP00000118933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 491 bps, Translation length: 99 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000138398.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000138398.3 ankzf1-203

Summary

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Transcript: ENSDART00000138398.3 ankzf1-203

Summary

About Us

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