Transcript: ENSDART00000138382.2 nfia-204

Description

nuclear factor I/A [Source:ZFIN;Acc:ZDB-GENE-050208-501]

Gene Synonyms

si:ch211-88d2.2, wu:fq27e07, zgc:158351

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 2052 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138233.3	nfia-203	3353	507aa	ENSDARP00000123045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L9B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000090237.6	nfia-201	2852	481aa	ENSDARP00000084670.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2R8	-
ENSDART00000090242.6	nfia-202	1395	464aa	ENSDARP00000084675.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDM0	-
ENSDART00000138382.2	nfia-204	782	253aa	ENSDARP00000113262.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L9A9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 782 bps, Translation length: 253 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138382.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.