Transcript: ENSDART00000138381.2 troap-202

Description

trophinin associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-1968]

Location

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 239 variant alleles and maps to 136 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133721.3	troap-201	2994	719aa	ENSDARP00000114107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178404.2	troap-203	2160	719aa	ENSDARP00000143303.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC53	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138381.2	troap-202	700	205aa	ENSDARP00000122516.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 700 bps, Translation length: 205 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138381.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.