Transcript: ENSDART00000138362.2 slf2-202

Description

SMC5-SMC6 complex localization factor 2 [Source:ZFIN;Acc:ZDB-GENE-081107-61]

Gene Synonyms

fam178a, si:dkey-19p15.8, si:dkey-19p15.9

Location

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 147 variant alleles and maps to 89 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000136689.3	slf2-201	5531	1129aa	ENSDARP00000118459.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QB81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138362.2	slf2-202	585	51aa	ENSDARP00000137741.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YJF8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 1, Transcript length: 585 bps, Translation length: 51 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138362.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.