Transcript: ENSDART00000138316.2 zgc:66484-202

Description

zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]

Gene Synonyms

fi17d03, wu:fi17d03

Location

Chromosome 9: 44,899,419-44,905,867 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 193 variant alleles and maps to 236 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000030478.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138316.2	zgc:66484-202	2104	495aa	ENSDARP00000115345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7C3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179383.2	zgc:66484-204	3914	495aa	ENSDARP00000144237.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7C3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159337.2	zgc:66484-203	3831	495aa	ENSDARP00000133718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7C3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131252.2	zgc:66484-201	1016	237aa	ENSDARP00000121410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBJ1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,104 bps, Translation length: 495 residues

Version

ENSDART00000138316.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000138316.2 zgc:66484-202

Summary

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Transcript: ENSDART00000138316.2 zgc:66484-202

Summary

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