Transcript: ENSDART00000138310.3 cacng6a-201

Description

calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]

Location

About this transcript

This transcript has 5 exons, is annotated with 22 domains and features, is associated with 235 variant alleles and maps to 133 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138310.3	cacng6a-201	2014	277aa	ENSDARP00000122169.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8R4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155948.3	cacng6a-202	1254	277aa	ENSDARP00000127532.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L8R4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,014 bps, Translation length: 277 residues

Version

ENSDART00000138310.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.