Transcript: ENSDART00000138303.2 zgc:153759-203

Description

zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]

Location

About this transcript

This transcript has 5 exons, is annotated with 23 domains and features, is associated with 6 variant alleles and maps to 40 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138303.2	zgc:153759-203	942	285aa	ENSDARP00000122325.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V330	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000099972.5	zgc:153759-202	1227	239aa	ENSDARP00000090744.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P2L7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145304.2	zgc:153759-204	807	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 942 bps, Translation length: 285 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138303.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.