Transcript: ENSDART00000138289.4 PREX1-202

Description

phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1428]

Location

About this transcript

This transcript has 39 exons, is annotated with 42 domains and features, is associated with 48 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078022.8	PREX1-203	8799	1622aa	ENSDARP00000072486.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6J2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138289.4	PREX1-202	7803	1608aa	ENSDARP00000117063.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000136869.2	PREX1-201	551	56aa	ENSDARP00000117163.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 39, Coding exons: 39, Transcript length: 7,803 bps, Translation length: 1,608 residues

Version

ENSDART00000138289.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.