Transcript: ENSDART00000138199.3 sept5a-202

Description

septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]

Gene Synonyms

fj37h04, sept5, wu:fj37h04, zgc:73218

Location

About this transcript

This transcript has 3 exons, is annotated with 7 domains and features, is associated with 339 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025535.8	sept5a-201	2278	410aa	ENSDARP00000023816.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPB5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138199.3	sept5a-202	859	100aa	ENSDARP00000121535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q856	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138462.2	sept5a-203	605	100aa	ENSDARP00000115327.1	Nonsense mediated decay	F1Q856	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 859 bps, Translation length: 100 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000138199.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.