Transcript: ENSDART00000138168.3 si:dkey-28d5.13-202

Description

si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 209 variant alleles and maps to 366 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172384.2	si:dkey-28d5.13-203	1842	368aa	ENSDARP00000138431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE57	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114543.3	si:dkey-28d5.13-201	1482	250aa	ENSDARP00000100250.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RER7	-
ENSDART00000138168.3	si:dkey-28d5.13-202	1185	368aa	ENSDARP00000117377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE57	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,185 bps, Translation length: 368 residues

Version

ENSDART00000138168.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.