Transcript: ENSDART00000138130.2 s100t-202

Description

S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]

Gene Synonyms

im:7139587, zgc:110771

Location

About this transcript

This transcript has 2 exons, is annotated with 7 domains and features, is associated with 184 variant alleles and maps to 211 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000077978.5	s100t-201	721	111aa	ENSDARP00000072444.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R758	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138130.2	s100t-202	673	67aa	ENSDARP00000122247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHF5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 673 bps, Translation length: 67 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000138130.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.