Transcript: ENSDART00000138120.2 PBDC1-201

Description

polysaccharide biosynthesis domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-459]

Gene Synonyms

cb679, fc12c03, sb:cb679, wu:fc12c03, zgc:92611

Location

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 137 variant alleles and maps to 145 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138120.2	PBDC1-201	1318	173aa	ENSDARP00000122028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DH77	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184502.1	PBDC1-203	740	163aa	ENSDARP00000151479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000079922.4	PBDC1-202	859	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,318 bps, Translation length: 173 residues

Version

ENSDART00000138120.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.