Transcript: ENSDART00000138079.2 psmc3ip-202

Description

PSMC3 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040625-125]

Gene Synonyms

zgc:86785

Location

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 302 variant alleles and maps to 181 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055228.7	psmc3ip-201	961	213aa	ENSDARP00000055227.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R122	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144278.3	psmc3ip-203	562	151aa	ENSDARP00000114670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEM5	-
ENSDART00000138079.2	psmc3ip-202	545	131aa	ENSDARP00000118668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI78	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 545 bps, Translation length: 131 residues

Version

ENSDART00000138079.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.