Transcript: ENSDART00000138026.2 gabra5-202

Description

gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]

Gene Synonyms

si:dkey-93p24.1

Location

About this transcript

This transcript has 11 exons, is annotated with 33 domains and features, is associated with 1152 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138026.2	gabra5-202	1853	453aa	ENSDARP00000117315.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE70	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000104135.5	gabra5-201	1613	453aa	ENSDARP00000094910.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE70	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144106.2	gabra5-203	785	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,853 bps, Translation length: 453 residues

Version

ENSDART00000138026.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.