Transcript: ENSDART00000137995.2 tjp3-202

Description

tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]

Gene Synonyms

cb766, wu:fj93c08

Location

About this transcript

This transcript has 20 exons, is annotated with 33 domains and features, is associated with 383 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000012336.10	tjp3-201	4268	1255aa	ENSDARP00000025259.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R3X0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137995.2	tjp3-202	2861	825aa	ENSDARP00000116937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHG6	-
ENSDART00000147070.3	tjp3-204	1848	480aa	ENSDARP00000120369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGL7	-
ENSDART00000139911.2	tjp3-203	880	294aa	ENSDARP00000117808.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXZ7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 2,861 bps, Translation length: 825 residues

Version

ENSDART00000137995.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.