Transcript: ENSDART00000137957.2 dnajb2-204

Description

DnaJ heat shock protein family (Hsp40) member B2 [Source:ZFIN;Acc:ZDB-GENE-061013-537]

Gene Synonyms

sb:eu730, zgc:153268

Location

About this transcript

This transcript has 8 exons, is annotated with 18 domains and features, is associated with 504 variant alleles and maps to 47 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102706.5	dnajb2-201	2117	389aa	ENSDARP00000093481.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135616.3	dnajb2-202	745	120aa	ENSDARP00000119073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6V7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137957.2	dnajb2-204	662	193aa	ENSDARP00000115225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QH24	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136438.2	dnajb2-203	705	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 662 bps, Translation length: 193 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000137957.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.