Transcript: ENSDART00000137921.2 otulinb-203

Description

OTU deubiquitinase with linear linkage specificity b [Source:ZFIN;Acc:ZDB-GENE-070912-627]

Location

Chromosome 2: 31,942,448-31,945,041 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 165 variant alleles and maps to 44 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079886.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146758.3	otulinb-206	1761	409aa	ENSDARP00000113277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2BAN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138684.3	otulinb-204	906	258aa	ENSDARP00000122933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137921.2	otulinb-203	661	176aa	ENSDARP00000115635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132113.3	otulinb-201	904	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000133182.3	otulinb-202	817	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138965.2	otulinb-205	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 661 bps, Translation length: 176 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000137921.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000137921.2 otulinb-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000137921.2 otulinb-203

Summary

About Us

Get help

Our sister sites

Follow us