Transcript: ENSDART00000137912.2 col14a1a-203

Description

collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]

Gene Synonyms

cb382, cb542, col14a1, sb:cb382, sb:cb542

Location

Chromosome 16: 14,707,960-14,800,345 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 17 domains and features, is associated with 1502 variant alleles and maps to 51 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000005762.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000027982.9	col14a1a-201	5595	1864aa	ENSDARP00000017432.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9Y1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134087.2	col14a1a-202	6466	1382aa	ENSDARP00000122257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVG7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137912.2	col14a1a-203	947	253aa	ENSDARP00000120255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QH60	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000138611.3	col14a1a-204	530	95aa	ENSDARP00000115530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QG40	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 947 bps, Translation length: 253 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000137912.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

Transcript: ENSDART00000137912.2 col14a1a-203

Summary

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Transcript: ENSDART00000137912.2 col14a1a-203

Summary

About Us

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