Transcript: ENSDART00000137905.3 nt5c2l1-202

Description

5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]

Location

About this transcript

This transcript has 18 exons, is annotated with 10 domains and features, is associated with 399 variant alleles and maps to 226 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007961.8	nt5c2l1-201	2250	518aa	ENSDARP00000020283.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q66I11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137905.3	nt5c2l1-202	2218	507aa	ENSDARP00000115228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000147794.2	nt5c2l1-204	717	239aa	ENSDARP00000117127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000144966.2	nt5c2l1-203	841	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 2,218 bps, Translation length: 507 residues

Version

ENSDART00000137905.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.