Transcript: ENSDART00000137725.2 cpsf2-202

Description

cleavage and polyadenylation specific factor 2 [Source:ZFIN;Acc:ZDB-GENE-040718-79]

Gene Synonyms

zgc:92484

Location

About this transcript

This transcript has 9 exons, is annotated with 12 domains and features, is associated with 358 variant alleles and maps to 318 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000188799.1	cpsf2-203	6406	790aa	ENSDARP00000156082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000047212.6	cpsf2-201	2675	790aa	ENSDARP00000047211.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVV4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137725.2	cpsf2-202	1938	570aa	ENSDARP00000122122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QX42	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,938 bps, Translation length: 570 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000137725.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.