Transcript: ENSDART00000137630.3 cct6a-202

Description

chaperonin containing TCP1, subunit 6A (zeta 1) [Source:NCBI gene (formerly Entrezgene);Acc:116994]

Location

Chromosome 21: 41,820,359-41,839,684 reverse strand.

About this transcript

This transcript has 15 exons, is annotated with 22 domains and features, is associated with 448 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021252.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000009484.10	cct6a-201	3922	531aa	ENSDARP00000016831.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZYX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000137630.3	cct6a-202	2262	531aa	ENSDARP00000118006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000160908.2	cct6a-204	2258	531aa	ENSDARP00000136804.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZYX4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000141067.2	cct6a-203	791	242aa	ENSDARP00000112608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 15, Coding exons: 14, Transcript length: 2,262 bps, Translation length: 531 residues

Version

ENSDART00000137630.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000137630.3 cct6a-202

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Transcript: ENSDART00000137630.3 cct6a-202

Summary

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