Transcript: ENSDART00000137582.2 creb1b-201

Description

cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]

Gene Synonyms

zgc:110211

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 157 variant alleles and maps to 52 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170094.2	creb1b-204	1789	324aa	ENSDARP00000132207.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IFU8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146932.3	creb1b-203	941	225aa	ENSDARP00000118912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHQ2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000137582.2	creb1b-201	622	106aa	ENSDARP00000116958.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHG0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140178.3	creb1b-202	1040	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 622 bps, Translation length: 106 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000137582.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.