Transcript: ENSDART00000137519.3 CYC1-204

Description

cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]

Location

Chromosome 6: 50,381,621-50,386,988 forward strand.

About this transcript

This transcript has 5 exons, is associated with 234 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000038075.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055504.6	CYC1-202	1591	307aa	ENSDARP00000055503.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3B7R0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141128.2	CYC1-205	486	131aa	ENSDARP00000116291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145555.2	CYC1-201	772	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000137519.3	CYC1-204	852	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151401.3	CYC1-203	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 852 bps,

Version

ENSDART00000137519.3

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000137519.3 CYC1-204

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Transcript: ENSDART00000137519.3 CYC1-204

Summary

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