Transcript: ENSDART00000137497.2 cts12-202

Description

cathepsin 12 [Source:ZFIN;Acc:ZDB-GENE-050208-336]

Gene Synonyms

ctskl, si:dkey-121a11.6

Location

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 283 variant alleles and maps to 111 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062749.6	cts12-201	1775	349aa	ENSDARP00000062748.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QCP8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193348.1	cts12-204	2014	281aa	ENSDARP00000148453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QAF1	-
ENSDART00000137497.2	cts12-202	859	264aa	ENSDARP00000119565.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7B2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000147409.2	cts12-203	769	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 859 bps, Translation length: 264 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000137497.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.