Transcript: ENSDART00000137434.2 PXYLP1-202

Description

2-phosphoxylose phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-127]

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 208 variant alleles and maps to 184 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059508.5	PXYLP1-201	1837	503aa	ENSDARP00000059507.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGF0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137434.2	PXYLP1-202	887	296aa	ENSDARP00000120688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 887 bps, Translation length: 296 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000137434.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.