Transcript: ENSDART00000137371.4 atp8b3-202

Description

ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]

Gene Synonyms

si:ch211-195m2.2

Location

About this transcript

This transcript has 27 exons, is annotated with 34 domains and features, is associated with 1035 variant alleles and maps to 128 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088890.5	atp8b3-201	3465	1154aa	ENSDARP00000083323.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QME5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000137371.4	atp8b3-202	9910	1107aa	ENSDARP00000122831.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQW4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 27, Coding exons: 26, Transcript length: 9,910 bps, Translation length: 1,107 residues

Version

ENSDART00000137371.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.