Transcript: ENSDART00000137345.2 slc38a5b-202

Description

solute carrier family 38 member 5b [Source:ZFIN;Acc:ZDB-GENE-040718-395]

Gene Synonyms

slc38a3, wu:fc31c02, wu:fc48a10, zgc:92015

Location

Chromosome 8: 23,581,631-23,583,855 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 99 variant alleles and maps to 163 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014587.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025024.7	slc38a5b-201	3610	472aa	ENSDARP00000004787.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG25	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183096.1	slc38a5b-204	1436	472aa	ENSDARP00000149956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG25	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139895.2	slc38a5b-203	846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000137345.2	slc38a5b-202	823	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 823 bps,

Version

ENSDART00000137345.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000137345.2 slc38a5b-202

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Transcript: ENSDART00000137345.2 slc38a5b-202

Summary

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