Transcript: ENSDART00000137239.2 si:ch211-216l23.2-202

Description

si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]

Location

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 338 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135236.3	si:ch211-216l23.2-201	2002	474aa	ENSDARP00000120005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N9Z2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189372.1	si:ch211-216l23.2-203	1212	119aa	ENSDARP00000150914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000137239.2	si:ch211-216l23.2-202	791	118aa	ENSDARP00000123641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 791 bps, Translation length: 118 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000137239.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.