Transcript: ENSDART00000137200.2 si:dkey-39a18.1-202

Description

si:dkey-39a18.1 [Source:ZFIN;Acc:ZDB-GENE-041210-127]

Gene Synonyms

zgc:158123

Location

About this transcript

This transcript has 5 exons, is associated with 170 variant alleles and maps to 62 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067151.6	si:dkey-39a18.1-201	2145	349aa	ENSDARP00000067150.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYZ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137200.2	si:dkey-39a18.1-202	458	58aa	ENSDARP00000125334.1	Nonsense mediated decay	H0WEQ6	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 458 bps, Translation length: 58 residues

Version

ENSDART00000137200.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.