Transcript: ENSDART00000137128.3 ap1b1-201

Description

adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]

Gene Synonyms

fa11e04, si:ch211-149d1.1, skb, skylab, wu:fa11e04

Location

Chromosome 5: 24,756,496-24,812,775 reverse strand.

About this transcript

This transcript has 22 exons, is annotated with 21 domains and features, is associated with 31 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020621.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137128.3	ap1b1-201	4387	947aa	ENSDARP00000122116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000182415.1	ap1b1-203	3135	976aa	ENSDARP00000148745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q6M9	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000190898.1	ap1b1-204	3063	952aa	ENSDARP00000155946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QRX3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000140042.2	ap1b1-202	654	124aa	ENSDARP00000116780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PMT0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 4,387 bps, Translation length: 947 residues

Version

ENSDART00000137128.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000137128.3 ap1b1-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000137128.3 ap1b1-201

Summary

About Us

Get help

Our sister sites

Follow us