Transcript: ENSDART00000137123.2 ccn5-202

Description

cellular communication network factor 5 [Source:ZFIN;Acc:ZDB-GENE-060223-1]

Gene Synonyms

ccn5, wisp2, zWISP2-c23

Location

About this transcript

This transcript has 2 exons, is annotated with 7 domains and features, is associated with 297 variant alleles and maps to 193 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053993.7	ccn5-201	1406	344aa	ENSDARP00000053992.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QG76	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147271.2	ccn5-203	508	164aa	ENSDARP00000121160.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R5C1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137123.2	ccn5-202	428	143aa	ENSDARP00000122264.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVF9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 428 bps, Translation length: 143 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000137123.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.