Transcript: ENSDART00000137083.2 impg2a-202

Description

interphotoreceptor matrix proteoglycan 2a [Source:ZFIN;Acc:ZDB-GENE-140106-217]

Gene Synonyms

si:ch211-88n13.3, zmp:0000001257

Location

About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 92 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137083.2	impg2a-202	812	270aa	ENSDARP00000119058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6Y4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000134070.2	impg2a-201	438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 812 bps, Translation length: 270 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000137083.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.