Transcript: ENSDART00000137021.2 cabp4-201

Description

calcium binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-291]

Gene Synonyms

cabp4a, si:ch73-56f16.1

Location

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 587 variant alleles and maps to 65 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000177174.2	cabp4-202	933	229aa	ENSDARP00000143613.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286Y9G4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137021.2	cabp4-201	506	134aa	ENSDARP00000112913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V3G0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 506 bps, Translation length: 134 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000137021.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.