Transcript: ENSDART00000136971.2 JADE1-203

Description

jade family PHD finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5648]

Location

Chromosome 17: 26,828,062-26,832,904 forward strand.

About this transcript

This transcript has 4 exons, is associated with 51 variant alleles and maps to 47 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000033707.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042060.5	JADE1-202	3842	829aa	ENSDARP00000042059.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QA19	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181269.1	JADE1-205	6264	829aa	ENSDARP00000152238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QA19	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143852.2	JADE1-204	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151869.2	JADE1-201	736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000136971.2	JADE1-203	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 539 bps,

Version

ENSDART00000136971.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000136971.2 JADE1-203

Summary

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Transcript: ENSDART00000136971.2 JADE1-203

Summary

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